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Investigation of the Delve Detect Cerebrospinal Fluid (CSF) Metagenomic Next-generation Sequencing (mNGS) Test When Used for the Initial Diagnostic Workup of Patients With Suspected Central Nervous System (CNS) Infection

RecruitingNAAges any - anyAllDelve Bio, Inc.
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In plain words

What the trial is, and whether it could suit you

Delve Bio, Inc. is a developer of novel mNGS tests with the goal of aiding in the diagnosis of infectious diseases in several clinical indications that may not have alternative traditional diagnostic methods routinely available. A proof of concept for the clinical utility of this mNGS testing methodology has been described in several seminal publications.1,2,3,4 Delve Bio is currently offering one of these assays as a laboratory-developed test (LDT) performed in a CLIA-certified, CAP-accredited laboratory. The test is called Delve Detect CSF. Delve Detect CSF is an mNGS in vitro diagnostic test intended for the simultaneous detection and differentiation of nucleic acids from multiple bacteria, viruses, fungi, and parasites in CSF from individuals suspected of meningitis or encephalitis. Delve Detect CSF identifies microbial nucleic acid in an unbiased and pathogen-agnostic manner. Histo

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📋 Eligibility rules (as published)
Inclusion Criteria: 1. Must be willing and able to provide informed consent or have a legally authorized representative (LAR) willing and able to provide informed consent for participation in the study: a. Adults, 18 years of age or older, must provide informed consent, or if unable to provide consent, must have voluntary informed consent provided by a LAR b. Children \< 18 years of age must have informed consent provided by a parent, guardian, or LAR, and: i. If 7 years of age or older, must provide voluntary assent for participation, unless unable to do so If less than 7 years of age, assent should also be obtained, if feasible. 2. Individuals presenting with, or admitted or transferred with, suspected CNS infection with at least 2 of the following clinical signs and symptoms: 1. Headache 2. Photophobia 3. Neck stiffness 4. Nausea/vomiting 5. Documented fever ≥ 38°C (100.4°F) 6. Altered mental status (defined as decreased or altered level of consciousness, lethargy, or personality change) lasting ≥ 24 h with no alternative cause identified 7. Generalized or partial seizures not fully attributable to a preexisting seizure disorder, identified toxic-metabolic derangement, or alcohol withdrawal 8. Abnormality of brain parenchyma on neuroimaging suggestive of CNS infection that is either new from prior studies or appears acute in onset 9. Abnormal spinal cord imaging suggestive of myelitis Note: The clinical signs and symptoms list above applies to non-infant participants (≥ 1 year old). Infants (\< 1 year old) who are suspected of CNS infection may be enrolled if they present with fever ≥ 38°C (100.4°F) OR hypothermia \< 36.5°C (97.7°F) AND at least 1 of the following clinical signs and symptoms: 1. Bulging fontanel (soft spot) 2. Lethargy or irritability 3. Refusing to feed or poor feeding 4. Apnea 5. Hypotonia or Hypertonia Exclusionary participant characteristics: 1. Unable to obtain consent (or assent, as applicable) from potential participant or legally authorized representative (LAR) 2. Established diagnosis of non-infectious etiology responsible for symptoms of meningitis/encephalitis/myelitis, with confirmation prior to lumbar puncture (LP) being performed 3. Established diagnosis of infectious etiology responsible for symptoms with microbiologic confirmation prior to LP being performed 4. Established diagnosis of infectious etiology responsible for symptoms prior to CSF sample being sent for testing with Delve Detect CSF Note: participants already consented and enrolled in the study who obtain a positive test result from SOC testing prior to the CSF sample being sent for testing with Delve Detect CSF will be withdrawn from the study and excluded from analysis. 5. Low clinical suspicion for infection with one of the following known diagnoses related to the patient admission prior to LP being performed. Remote history of these diagnoses does not exclude the patient from eligibility: 1. Trauma 2. Ischemic or hemorrhagic stroke unless suspected to be due to infectious etiology 3. Postictal or metabolic encephalopathy 4. Malignancy without present infection symptoms 5. Demyelinating disease Exclusionary CSF sample characteristics: 6. No evidence of CSF pleocytosis (defined as CSF white blood cell count (WBC) ≥ 5 cells per μL) in the first LP collected. Note: Exclusion criterion 4 applies to participants who are immunocompetent or otherwise not known to have a current immunodeficiency or immunocompromised status. Individuals with a current immunodeficiency or immunocompromised status (as defined in Section 9.3) may be enrolled with or without the presence of CSF pleocytosis and continue to final analysis. 7. Insufficient residual CSF volume available for Delve Detect testing (\< 500 μL) 8. The residual CSF sample available for testing with Delve Detect CSF was not the first diagnostic LP for the participant's current admission 9. Residual CSF was stored at room temperature for ≥ 6 hours 10. Residual CSF was stored refrigerated (2-8 °C) for ≥ 7 days 11. Residual CSF was stored frozen (≤ -70 °C) for ≥ 90 days 12. Residual CSF experienced more than a cumulative two freeze-thaw cycles
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What it tests

  • Delve Detect CSF mNGS Test
  • Real-World Data
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Where

5 sites
University of California at San Francisco at Zuckerberg San Francisco General
San Francisco, United States
Emory University Hospital
Atlanta, United States
University of Maryland, Baltimore
Baltimore, United States
Lahey Hospital & Medical Center
Burlington, United States
Vanderbilt University Medical Center
Nashville, United States
🤝 Taking part is your choice, and you can leave at any time. Only the trial team can confirm you are eligible — always decide together with your own doctor.
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